HNRNPD
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Official Full Name
heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -
Overview
This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are nucleic acid binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene has two repeats of quasi-RRM domains that bind to RNAs. It localizes to both the nucleus and the cytoplasm. This protein is implicated in the regulation of mRNA stability. Alternative splicing of this gene results in four transcript variants. -
Synonyms
HNRNPD;heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa);AUF1, heterogeneous nuclear ribonucleoprotein D (AU rich element RNA binding protein 1, 37kD) , HNRPD;heterogeneous nuclear ribonucleoprotein D0;hnRNP D0
Recombinant Proteins
- Human
- Rhesus macaque
- Chicken
- Zebrafish
- Mouse
- E.coli
- Mammalian Cells
- Wheat Germ
- HEK293
- In Vitro Cell Free System
- GST
- His
- Non
- Myc&DDK
- His&Fc&Avi
- Flag
Involved Pathway
HNRNPD involved in several pathways and played different roles in them. We selected most pathways HNRNPD participated on our site, such as AUF1 (hnRNP D0) binds and destabilizes mRNA,Gene Expression,Processing of Capped Intron-Containing Pre-mRNA, which may be useful for your reference. Also, other proteins which involved in the same pathway with HNRNPD were listed below. Creative BioMart supplied nearly all the proteins listed, you can search them on our site.
| Pathway Name | Pathway Related Protein |
|---|---|
| mRNA Splicing | SNRNP35,SFRS3A,HNRNPF,HNRNPH1,RNPC3,ZMAT5,HNRNPA2B1,BCAS2,HNRNPA0A,PRPF8 |
| mRNA processing | PRPF4B,OASL2,PSKH1,RBM5,QK,HNRNPAB,RNASET2B,HNRNPH2,NONO,CLK4 |
| Processing of Capped Intron-Containing Pre-mRNA | CSTF2,SFRS3A,SLBP,NXF1,RNPS1,HNRNPUL1,SNRNP25,HNRNPR,WTAP,ZMAT5 |
| Gene Expression | CBX3,EHMT2,ZNF680,TSEN15,TAF1A,ZNF599,NR1D2B,SUZ12,COX5B,TRMT112 |
| AUF1 (hnRNP D0) binds and destabilizes mRNA | PSMD10,PSMA8,EIF4G1,PSMD5,PSMD14,PSME3,PSMD9 |
| Regulation of mRNA stability by proteins that bind AU-rich elements | ZFP36L1A,SET,ELAVL1,ANP32A,ZFP36L1,SETA,KHSRP,HUG,ZFP36L1B,TNPO1 |
| mRNA Splicing - Major Pathway | HNRNPUL1,HNRNPA0B,BCAS2,SF3A3,HNRNPL,PCBP2,YBX1,HNRNPA2B1,PTBP1,HNRNPH1 |
Protein Function
HNRNPD has several biochemical functions, for example, RNA binding,nucleotide binding,poly(A) RNA binding. Some of the functions are cooperated with other proteins, some of the functions could acted by HNRNPD itself. We selected most functions HNRNPD had, and list some proteins which have the same functions with HNRNPD. You can find most of the proteins on our site.
| Function | Related Protein |
|---|---|
| nucleotide binding | MYHZ2,VMHCL,ABCD3,HNRNPABB,ABCG2A,HIPK2,ARL4CA,GNAV1,DDX19,ATP2B3B |
| telomeric DNA binding | NCL,OBFC1,TINF2,TERFA,CTC1,TEN1,POT1A,XRCC5,TERF1,SMG6 |
| RNA binding | CLUHA,ZRANB2,FARSB,NHP2L1B,DIS3,AGO3B,CNOT7,TNRC6B,THOC2,A1CF |
| protein binding | RPGRIP1L,C5orf13,PER2,AKAP8L,CNTNAP4,DDR2,SMCP,TK1,NRBF2,PYGM |
| poly(A) RNA binding | ZCRB1,ZNF638,TRUB2,CNBP,HNRNPL,RPL3,UBE2I,PRPF8,RPL35A,RBM7 |
Interacting Protein
HNRNPD has direct interactions with proteins and molecules. Those interactions were detected by several methods such as yeast two hybrid, co-IP, pull-down and so on. We selected proteins and molecules interacted with HNRNPD here. Most of them are supplied by our site. Hope this information will be useful for your research of HNRNPD.
ING4;HNRNPU;LDHAL6B;Cep152;Kif1c;Shoc2;ACTB;EXOSC2;HNRNPC;SNRPC
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References
- Komlosi, K; Duga, B; et al. Phenotypic variability in a Hungarian patient with the 4q21 microdeletion syndrome. MOLECULAR CYTOGENETICS 8:-(2015).
- Ishii, T; Hayakawa, H; et al. Role of Auf1 in elimination of oxidatively damaged messenger RNA in human cells. FREE RADICAL BIOLOGY AND MEDICINE 79:109-116(2015).
