DNMT3A

  • Official Full Name

    DNA (cytosine-5-)-methyltransferase 3 alpha
  • Overview

    CpG methylation is an epigenetic modification that is important for embryonic development, imprinting, and X-chromosome inactivation. Studies in mice have demonstrated that DNA methylation is required for mammalian development. This gene encodes a DNA methyltransferase that is thought to function in de novo methylation, rather than maintenance methylation. The protein localizes to the cytoplasm and nucleus and its expression is developmentally regulated. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]
  • Synonyms

    DNMT3A;DNA (cytosine-5-)-methyltransferase 3 alpha;DNMT3A2;M.HsaIIIA;DNA (cytosine-5)-methyltransferase 3A;DNA MTase HsaIIIA;DNA cytosine methyltransferase 3A2

Recombinant Proteins

  • Human
  • Rat
  • Chicken
  • Mouse
  • E.coli
  • Sf9 Cells
  • Mammalian Cells
  • Wheat Germ
  • Insect Cells
  • HEK293
  • In Vitro Cell Free System
  • GST
  • His
  • Flag
  • Non
  • GST&Strep II
  • Avi&Fc&His
  • DDK&Myc
  • Flag&His
  • His&Myc
Cat.# Product name Source (Host) Species Tag Protein Length Price
DNMT3A-12110H Recombinant Human DNMT3A, GST-tagged E.coli Human GST 1-280a.a.
DNMT3A-21H Recombinant Human DNMT3A protein, His-tagged E.coli Human His Ile634~Val912
DNMT3A-164H Active Recombinant Human DNMT3A, GST-tagged Sf9 Cells Human GST
DNMT3A-01HFL Active Recombinant Full Length Human DNMT3A Protein, Flag-tagged Mammalian Cells Human Flag Full L.
DNMT3A-02HFL Active Recombinant Full Length Human DNMT3A Protein, Flag-tagged Mammalian Cells Human Flag Full L.
DNMT3A-1926R Recombinant Rat DNMT3A Protein Mammalian Cells Rat His
DNMT3A-2202C Recombinant Chicken DNMT3A Mammalian Cells Chicken His
DNMT3A-26885TH Recombinant Human DNMT3A, His-tagged E.coli Human His 269-546 a.a.
DNMT3A-2790H Recombinant Human DNMT3A Protein, GST-tagged Wheat Germ Human GST
DNMT3A-390H Recombinant Human DNMT3A, His-tagged Insect Cells Human His
DNMT3A-4741M Recombinant Mouse DNMT3A Protein Mammalian Cells Mouse His
DNMT3A-513H Recombinant Human DNMT3A, GST-tagged Insect Cells Human GST 2-913 a.a.
DNMT3A-73H Recombinant Human DNM3A protein, GST-tagged Insect Cells Human GST 2-912
DNMT3A-6855HCL Recombinant Human DNMT3A 293 Cell Lysate HEK293 Human Non
DNMT3A-01H Recombinant Human DNMT3A Protein, GST/StrepII-tagged Insect Cells Human GST&Strep II 214-912
Dnmt3a-03MFL Recombinant Full Length Mouse Dnmt3a Protein, Flag-tagged Mammalian Cells Mouse Flag Full L.
DNMT3A-1122HFL Recombinant Full Length Human DNMT3A Protein, C-Flag-tagged Mammalian Cells Human Flag Full L.
DNMT3A-1585R Recombinant Rat DNMT3A Protein, His (Fc)-Avi-tagged HEK293 Rat Avi&Fc&His
DNMT3A-1585R-B Recombinant Rat DNMT3A Protein Pre-coupled Magnetic Beads HEK293 Rat
DNMT3A-1978H Recombinant Human DNMT3A Protein (Ala628-Val912), N-His tagged E.coli Human His Ala628-Val912
DNMT3A-20H Recombinant Human DNMT3A, His-tagged E.coli Human His 680-902aa
DNMT3A-22H Recombinant Human DNMT3A protein, GST-tagged E.coli Human GST 278 - 432 aa
DNMT3A-2473M Recombinant Mouse DNMT3A Protein, His (Fc)-Avi-tagged HEK293 Mouse Avi&Fc&His
DNMT3A-2473M-B Recombinant Mouse DNMT3A Protein Pre-coupled Magnetic Beads HEK293 Mouse
Dnmt3a-2621M Recombinant Mouse Dnmt3a Protein, Myc/DDK-tagged HEK293 Mouse DDK&Myc
DNMT3A-391H Active Recombinant Human DNMT3A Protein, N-6xHis-FLAG-tagged Insect Cells Human Flag&His 214-912 aa
DNMT3A-4049HF Recombinant Full Length Human DNMT3A Protein, GST-tagged In Vitro Cell Free System Human GST Full L. 912 amino acids
DNMT3A-4534H Recombinant Human DNMT3A protein, His&Myc-tagged E.coli Human His&Myc 1-166a.a.
DNMT3A-779H Recombinant Human DNMT3A Protein, His (Fc)-Avi-tagged HEK293 Human Avi&Fc&His
DNMT3A-779H-B Recombinant Human DNMT3A Protein Pre-coupled Magnetic Beads HEK293 Human

    Background

    What is Dnmt3a protein?

    Dnmt3a protein, also known as DNA (cytosine-5)-methyltransferase 3A, is an enzyme that plays a crucial role in DNA methylation. It is involved in the addition of a methyl group to the 5th carbon of cytosine residues in DNA, leading to the formation of 5-methylcytosine. DNA methylation is an epigenetic modification that regulates gene expression and is essential for normal development and cellular function.

    What is the function of Dnmt3a protein?

    Dnmt3a primarily functions during early embryonic development and is responsible for establishing the DNA methylation patterns in the genome. It is also involved in maintaining DNA methylation patterns throughout life by ensuring faithful replication and inheritance of methylation marks during cell division.

    Dnmt3a mutations have been implicated in several diseases, including myelodysplastic syndrome (MDS) and acute myeloid leukemia (AML), where abnormal DNA methylation patterns contribute to the development of these malignancies.

    Dnmt3a related signaling pathway

    Dnmt3a plays a crucial role in epigenetic regulation by controlling gene expression through DNA methylation. Dysregulation of Dnmt3a has been associated with various diseases, including cancer. In particular, mutations in Dnmt3a have been identified in acute myeloid leukemia (AML) patients.

    The exact signaling pathway involving Dnmt3a is still being investigated. However, it is known that Dnmt3a interacts with other proteins and factors involved in DNA methylation, chromatin remodeling, and gene expression regulation. These include Dnmt3L (Dnmt3a cofactor), histone modifying enzymes, transcription factors, and chromatin remodeling complexes.

    Dnmt3a Related Diseases

    •  Acute Myeloid Leukemia (AML): Dnmt3a mutations are frequently found in patients with AML, particularly in cases with normal cytogenetics. These mutations contribute to abnormal DNA methylation patterns and impaired differentiation of hematopoietic stem cells.
    •  Myelodysplastic Syndromes (MDS): Dnmt3a mutations are also observed in patients with MDS, a heterogeneous group of bone marrow disorders characterized by ineffective blood cell production. Dnmt3a mutations are associated with dysregulated DNA methylation and altered hematopoietic stem cell function.
    •  Solid Tumors: Dnmt3a mutations have been reported in various solid tumors, although their prevalence in these cancers is relatively low compared to hematological malignancies.
    •  Cancer research and therapy: Dnmt3a mutations are frequently found in various cancers, including acute myeloid leukemia (AML). Understanding the role of Dnmt3a mutations in cancer development and progression can help in the development of targeted therapies. Inhibitors targeting Dnmt3a activity are also being investigated as potential cancer treatments.
    •  Biomarker discovery: Dnmt3a mutations or altered expression levels have been identified as potential biomarkers for several diseases, including cancer. Detection of these biomarkers can assist in disease diagnosis, prognosis, and monitoring treatment response.

    Biomedical Application of Dnmt3a Protein

    •  Cancer research and therapy: Dnmt3a mutations are frequently found in various cancers, including acute myeloid leukemia (AML). Understanding the role of Dnmt3a mutations in cancer development and progression can help in the development of targeted therapies. Inhibitors targeting Dnmt3a activity are also being investigated as potential cancer treatments.
    •  Epigenetic research: Studying the function and regulation of Dnmt3a contributes to understanding epigenetic modifications and their impact on gene expression and cellular processes. This knowledge can aid in deciphering the mechanisms underlying various diseases and developing new therapeutic strategies.
    •  Reprogramming of stem cells: Dnmt3a plays a crucial role in the establishment and maintenance of DNA methylation patterns during embryonic development. Manipulating Dnmt3a expression or activity can influence the reprogramming of somatic cells into induced pluripotent stem cells (iPSCs), allowing for the generation of patient-specific stem cells for disease modeling and regenerative medicine.
    •  Reprogramming of stem cells: Dnmt3a plays a crucial role in the establishment and maintenance of DNA methylation patterns during embryonic development. Manipulating Dnmt3a expression or activity can influence the reprogramming of somatic cells into induced pluripotent stem cells (iPSCs), allowing for the generation of patient-specific stem cells for disease modeling and regenerative medicine.

    Case Study

    DNMT3A

    (Rachel Deplus, 2014)

    Fig3. Orthophosphate labeling of Dnmt3a-overexpressing cells. U2OS cells were transiently transfected with Myc-Dnmt3a (lane 2) or empty vector (lane 1) and incubated with 32Pi for 4 hr prior to immunoprecipitation (IP) with Myc antibody. A representative experiment is shown, which was successfully repeated three times.

    DNMT3A

    (Chao-Cheng Cho, 2023)


    Fig4. Expression and purification of the catalytic domains of human DNMT1, DNMT3A-3L, and DNMT3B-3L. (B) Elution profiles of DNMT1, DNMT3A-3L, and DNMT3B-3L via size-exclusion chromatography (HiLoad 16/60 Superdex 200, GE Healthcare). (C) SDS-PAGE analysis of purified DNMT1, DNMT3A-3L, and DNMT3B-3L reveals high homogeneity for each recombinant protein. M, molecular weight marker.


    Quality Guarantee

    High Purity

    DNMT3A

    Fig1. SDS-PAGE (DNMT3A-2790H)

    High Bioactivity & Detection Sensitivity

    DNMT3A

    Fig2. DNMT3A activity verified in a biochemical assay: DNMT3A (DNA (cytosine-5-)-methyltransferase 3 alpha) is a DNA methyltransferase that is thought to function in de novo methylation, rather than maintenance methylation. It modifies DNA in a non-processive manner and also methylates non-CpG sites. Varying concentrations of DNMT3A were added to a microplate containing a bound methyltransferase substrate. After incubation, the resulting methylated DNA residues were detected immunologically and a colorimetric signal was generated and measured.
    Surface Plasmon Ressonance (SPR)

    Involved Pathway

    DNMT3A involved in several pathways and played different roles in them. We selected most pathways DNMT3A participated on our site, such as Chromatin modifying enzymes,Chromatin organization,Cysteine and methionine metabolism, which may be useful for your reference. Also, other proteins which involved in the same pathway with DNMT3A were listed below. Creative BioMart supplied nearly all the proteins listed, you can search them on our site.

    Pathway Name Pathway Related Protein
    Chromatin organization DR1,MBD3,SMARCC1,JHDM1D,KAT6A,ZZZ3,CARM1,KDM5A,ATF7IP,ARID2
    Cysteine and methionine metabolism LDHB,GOT2A,DNMT4,GOT2,CBS,DNMT1,LDHAL6B,BCAT1,SRM,AGXT2
    Chromatin modifying enzymes CSRP2BP,MORF4L1,PBRM1,RBBP7,DPY30,MORF4L2,PHF17,C17orf81,KDM5A,AEBP2
    Metabolic pathways NDUFA9,AMY1A,ITPA,HADHAA,SUCLG2,HYAL2,CEPT1,DPAGT1,GPI,TPI1B
    MicroRNAs in cancer PIM1,Pdgfa&Pdgfb,PRKCE,SOX4,TGFB2,TRIM71,MTOR,MCL1,IKBKB,Casp3
    Gene Expression ZNF433,NR1D2,HNRPL,METTL14,METTL1,ZNF771,UHRF1,CCAR1,FKBP6,CSTF1
    Epigenetic regulation of gene expression SAP30,DNMT3B,UHRF1,TAF1B,TAF1C,SAP130,H3F3D,SMARCA5,SAP30L,H3F3B.1
    DNA methylation DNMT3L,DNMT1,UHRF1,DNMT3B

    Protein Function

    DNMT3A has several biochemical functions, for example, DNA (cytosine-5-)-methyltransferase activity,DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates,DNA binding. Some of the functions are cooperated with other proteins, some of the functions could acted by DNMT3A itself. We selected most functions DNMT3A had, and list some proteins which have the same functions with DNMT3A. You can find most of the proteins on our site.

    Function Related Protein
    unmethylated CpG binding MLL1,CXXC1,DNMT3B,KDM2A
    chromatin binding ATXN7,ORC1L,SSBP1,NONO,APBB1,RELA,ASH1L,CRX,CSNK2B,MSL1
    protein binding PMEPA1,DNAIC2,Icosl,ZBTB5,GOLM1,GREM1,HIST4H4,GTF3C5,RAB27A,NFASC
    DNA binding SUB1B,ZFP335,HER8.2,PBRM1,FOXC1B,BARHL1B,OASL,IRX3A,RX3,VDR
    DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates DNMT3B
    metal ion binding PPP2CA,MT2,CYP7A1A,CDK5RAP1,TUT1,FCER2,KDM4D,PPP4CB,TRIM35-36,MICALL2
    DNA-methyltransferase activity DNMT4,RNMTL1B,PRDM11,METTL23,DNMT3AB,NDUFAF5,DIMT1,TRMT10C,DNMT3B,FBLL1
    identical protein binding PUF60,DVL2,VWA1,CHEK2,IMPA1,KCNJ2,CLDN11,DYNLT1A,REG3B,HOOK2
    DNA (cytosine-5-)-methyltransferase activity TRDMT1,DNMT3B,DNMT1

    Interacting Protein

    DNMT3A has direct interactions with proteins and molecules. Those interactions were detected by several methods such as yeast two hybrid, co-IP, pull-down and so on. We selected proteins and molecules interacted with DNMT3A here. Most of them are supplied by our site. Hope this information will be useful for your research of DNMT3A.

    EZH2;H3F3A;SETDB1

    Resources

    References

    • Deplus, R; Blanchon, L; et al. Regulation of DNA Methylation Patterns by CK2-Mediated Phosphorylation of Dnmt3a. CELL REPORTS 8:743-753(2014).
    • Ahearne, MJ; Allchin, RL; et al. Follicular helper T-cells: expanding roles in T-cell lymphoma and targets for treatment. BRITISH JOURNAL OF HAEMATOLOGY 166:326-335(2014).

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