DDX39B
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Official Full Name
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B -
Synonyms
DDX39B;DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B;BAT1, HLA B associated transcript 1;spliceosome RNA helicase DDX39B;D6S81E;U2AF65 associated protein 56;UAP56;spliceosome RNA helicase BAT1;ATP-dependent RNA helicase p47;56 kDa U2AF65-associated protein;nuclear RNA helicase (DEAD family);HLA-B-associated transcript 1 protein;BAT1
Recombinant Proteins
- Human
- Rhesus macaque
- Zebrafish
- Rat
- Mouse
- Wheat Germ
- Mammalian Cell
- E.coli
- HEK293
- In Vitro Cell Free System
- Mammalian cells
- HEK293T
- GST
- His
- Non
- His&Fc&Avi
- Flag
- Myc&DDK
Involved Pathway
DDX39B involved in several pathways and played different roles in them. We selected most pathways DDX39B participated on our site, such as RNA transport,mRNA surveillance pathway,Spliceosome, which may be useful for your reference. Also, other proteins which involved in the same pathway with DDX39B were listed below. Creative BioMart supplied nearly all the proteins listed, you can search them on our site.
| Pathway Name | Pathway Related Protein |
|---|---|
| mRNA surveillance pathway | ETF1,PPP2R5CB,MAGOHB,NCBP1,CPSF1,PPP2R5A,PABPC4,PAPOLG,SRRM1,PPP2R2B |
| Spliceosome | HSPA1A,LSM6,HNRNPA1A,SYF2,SNRPD3L,THOC3,SRSF6,CCDC12,PRPF38A,SNRPD1 |
| Influenza A | CYCS,MYD88,MAPK1,MAPK3,IRAK4,IL1B,MAPK13,BCL2L2-PABPN1,IFNA2,HNRNPUL1 |
| RNA transport | NUP93,RBM8A,PABPC1L2A,EIF3HA,XPOT,EIF2B1,THOC2,EIF3EA,POM121L2,NUP210L |
Protein Function
DDX39B has several biochemical functions, for example, ATP binding,ATP-dependent RNA helicase activity,ATP-dependent protein binding. Some of the functions are cooperated with other proteins, some of the functions could acted by DDX39B itself. We selected most functions DDX39B had, and list some proteins which have the same functions with DDX39B. You can find most of the proteins on our site.
| Function | Related Protein |
|---|---|
| RNA-dependent ATPase activity | IGHMBP2,YTHDC2,DDX17 |
| ATP binding | RIPK1L,PKZ,MCCC1,RBM4.3,ABCC1,ERBB2,NLRC3,NIM1,FLJ11011L,UBA5 |
| poly(A) RNA binding | RPS16,TCERG1,BST2,PPIA,CDC5L,ZC3H15,SAFB2,EEF2,RBM26,EIF3G |
| protein binding | SH3YL1,CLPB,BCAP31,CXorf48,CDC42EP5,ACTG1,RPL10A,RTN3,RBM23,FSTL3 |
| U4 snRNA binding | PRPF31,PRPF4,NHP2L1,SART3 |
| ATP-dependent protein binding | STX1A,PRNP,DNAJC5,SAE1,MYO5A |
| ATP-dependent RNA helicase activity | SKIV2L,DDX47,DHX33,EIF4A1B,SNRNP200,DDX49,DHX30,DDX5,DDX19B,TDRD9 |
| U6 snRNA binding | SART3,LSM7,EIF5A,LSM8,LSM2,PRPF4,PRPF8,RBM22,LSM4 |
Interacting Protein
DDX39B has direct interactions with proteins and molecules. Those interactions were detected by several methods such as yeast two hybrid, co-IP, pull-down and so on. We selected proteins and molecules interacted with DDX39B here. Most of them are supplied by our site. Hope this information will be useful for your research of DDX39B.
CHTOP;ALYREF;THOC1;THOC2;EIF4A3;YWHAG;Erh
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